Flat annual custodian fee or a percent of assets, when funding one 40k note first?
Consider an investor setting up a self-directed IRA to move about 60,000 dollars of old retirement money into real estate paper, facing two custodian fee models shaped completely differently. One is a flat annual fee plus a per-transaction charge every time money moves. The other is a percentage of account value with unlimited transactions. A self-directed IRA, for anyone new to the structure, is a retirement account at a custodian that will hold private assets like a loan or a syndication interest instead of only public funds. The custodian does not pick anything, it holds title and processes what the account holder directs. The flat fee looks cheap on a small account and stays cheap as the account grows, so an account that becomes 300,000 dollars of notes in eight years would pay the same as it does on 60,000. But every payoff, every new loan funded, every wire is another line item, and an account running a lot of small short term loans accumulates those charges fast. The percentage model punishes growth and rewards activity, the mirror image problem. The fit depends on turnover: a small note book that turns over frequently tends to favor the flat fee structure despite the per-transaction charges, while a buy and hold note portfolio that rarely transacts favors the flat fee even more, since the percentage model keeps charging on a growing balance regardless of activity.
For a small self-directed IRA deploying into notes, which custodian fee model would you take?
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